Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase I (B0SPB4)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B0SPB4
- Type
- protein
- Length
- 240 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC844D928d873971D6B9E59c8C689034D26A37f39
- Molecule
- Ribosomal RNA small subunit methyltransferase I
- UniProt
- B0SPB4
- Pockets
- 3 · best druggability 0.58
Structure
1 distinct chain · 34% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase I | protein | 240 | 34% helix, 23% strand | B0SPB4 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.58 | 0.85 | 21 | empty |
| 2 | 60 | 0.36 | 0.78 | 13 | empty |
| 3 | 63 | 0.31 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B0SPB4
- Elsewhere: UniProt B0SPB4 · AlphaFold DB B0SPB4
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.