Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase H (Q9PQA4)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9PQA4
- Type
- protein
- Length
- 308 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC1B6297a2481813328d361F474DA565bfE4Ac044
- Molecule
- Ribosomal RNA small subunit methyltransferase H
- UniProt
- Q9PQA4
- Pockets
- 2 · best druggability 0.77
Structure
1 distinct chain · 45% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase H | protein | 308 | 45% helix, 15% strand | Q9PQA4 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 554 | 0.77 | 0.84 | 59 | empty |
| 2 | 122 | 0.48 | 0.79 | 23 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9PQA4
- Elsewhere: UniProt Q9PQA4 · AlphaFold DB Q9PQA4
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