Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase H (B4SJW8)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4SJW8
- Type
- protein
- Length
- 322 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x1Fbc4334c6ACf0E9Cee9C8366EAB84F4575214B6
- Molecule
- Ribosomal RNA small subunit methyltransferase H
- UniProt
- B4SJW8
- Pockets
- 4 · best druggability 0.81
Structure
1 distinct chain · 43% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase H | protein | 322 | 43% helix, 15% strand | B4SJW8 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 607 | 0.81 | 0.86 | 68 | empty |
| 2 | 137 | 0.43 | 0.75 | 17 | empty |
| 3 | 94 | 0.35 | 0.75 | 18 | empty |
| 4 | 69 | 0.32 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4SJW8
- Elsewhere: UniProt B4SJW8 · AlphaFold DB B4SJW8
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