Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase H 1 (A9KS30)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9KS30
- Type
- protein
- Length
- 366 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x49b5F5426914eC7Aec4dCA2Fe93B85b48232e9c6
- Molecule
- Ribosomal RNA small subunit methyltransferase H 1
- UniProt
- A9KS30
- Pockets
- 4 · best druggability 0.78
Structure
1 distinct chain · 47% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase H 1 | protein | 366 | 47% helix, 13% strand | A9KS30 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 693 | 0.78 | 0.83 | 80 | empty |
| 2 | 137 | 0.45 | 0.77 | 16 | empty |
| 3 | 131 | 0.42 | 0.75 | 25 | empty |
| 4 | 50 | 0.30 | 0.76 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9KS30
- Elsewhere: UniProt A9KS30 · AlphaFold DB A9KS30
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