Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase G (P25813)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P25813
- Type
- protein
- Length
- 239 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc747B9121c6447a3B7701F18EEF77222C7A174F2
- Molecule
- Ribosomal RNA small subunit methyltransferase G
- UniProt
- P25813
- Pockets
- 2 · best druggability 0.45
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase G | protein | 239 | 42% helix, 22% strand | P25813 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.45 | 0.80 | 17 | empty |
| 2 | 60 | 0.29 | 0.75 | 12 | empty |
Compared structures
- 1XDZ · Crystal structure of GRAM_POSITIVE bacillus subtilis glucose inhibited division protein B… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 1XDZ · Crystal Structure of Gram_Positive Bacillus subtilis Glucose inhibited Division protein B… · an experimental structure of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25813
- Elsewhere: UniProt P25813 · AlphaFold DB P25813
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