Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (A8H3W2)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8H3W2
- Type
- protein
- Length
- 488 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5e58272ea25a05e06901A2eAe9f63939b344e0c6
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- A8H3W2
- Pockets
- 6 · best druggability 0.65
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 488 | 33% helix, 25% strand | A8H3W2 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 313 | 0.65 | 0.81 | 44 | empty |
| 2 | 167 | 0.55 | 0.80 | 25 | empty |
| 3 | 240 | 0.52 | 0.76 | 38 | empty |
| 4 | 79 | 0.40 | 0.78 | 24 | empty |
| 5 | 82 | 0.38 | 0.77 | 18 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8H3W2
- Elsewhere: UniProt A8H3W2 · AlphaFold DB A8H3W2
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