Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (A1S788)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1S788
- Type
- protein
- Length
- 467 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9D1954b08C3Efe67349764a1a1c6cD59AD47139A
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- A1S788
- Pockets
- 5 · best druggability 0.57
Structure
1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 467 | 34% helix, 25% strand | A1S788 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 271 | 0.57 | 0.77 | 49 | empty |
| 2 | 169 | 0.50 | 0.77 | 29 | empty |
| 3 | 73 | 0.49 | 0.84 | 16 | empty |
| 4 | 118 | 0.43 | 0.77 | 17 | empty |
| 5 | 72 | 0.37 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1S788
- Elsewhere: UniProt A1S788 · AlphaFold DB A1S788
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