Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (Q8Z662)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8Z662
- Type
- protein
- Length
- 479 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9D5C9De6C5C3671acfCbAbeE5E32d03B466e4743
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- Q8Z662
- Pockets
- 6 · best druggability 0.55
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 479 | 33% helix, 25% strand | Q8Z662 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 260 | 0.55 | 0.77 | 38 | empty |
| 2 | 110 | 0.46 | 0.79 | 23 | empty |
| 3 | 123 | 0.41 | 0.76 | 22 | empty |
| 4 | 106 | 0.40 | 0.76 | 20 | empty |
| 5 | 55 | 0.33 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8Z662
- Elsewhere: UniProt Q8Z662 · AlphaFold DB Q8Z662
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