Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (B5BHA6)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5BHA6
- Type
- protein
- Length
- 479 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7A55eafeB7B90aCa2daf99D6ecf4c7062e94a2b1
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- B5BHA6
- Pockets
- 4 · best druggability 0.56
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 479 | 33% helix, 25% strand | B5BHA6 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 348 | 0.56 | 0.75 | 44 | empty |
| 2 | 214 | 0.55 | 0.79 | 38 | empty |
| 3 | 122 | 0.44 | 0.77 | 22 | empty |
| 4 | 61 | 0.35 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5BHA6
- Elsewhere: UniProt B5BHA6 · AlphaFold DB B5BHA6
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