Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (B4TKI0)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4TKI0
- Type
- protein
- Length
- 479 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- B4TKI0
- Pockets
- 5 · best druggability 0.56
Structure
1 distinct chain · 32% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 479 | 32% helix, 25% strand | B4TKI0 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 336 | 0.56 | 0.75 | 45 | empty |
| 2 | 230 | 0.55 | 0.78 | 39 | empty |
| 3 | 127 | 0.43 | 0.76 | 23 | empty |
| 4 | 56 | 0.36 | 0.78 | 17 | empty |
| 5 | 52 | 0.33 | 0.78 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4TKI0
- Elsewhere: UniProt B4TKI0 · AlphaFold DB B4TKI0
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