Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (B5R2S1)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5R2S1
- Type
- protein
- Length
- 479 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xC8d0a0DC57E6d8881262B3e948BBDE57dA8654E4
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- B5R2S1
- Pockets
- 6 · best druggability 0.57
Structure
1 distinct chain · 32% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 479 | 32% helix, 25% strand | B5R2S1 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 350 | 0.57 | 0.76 | 46 | empty |
| 2 | 227 | 0.54 | 0.78 | 39 | empty |
| 3 | 121 | 0.42 | 0.76 | 21 | empty |
| 4 | 63 | 0.37 | 0.78 | 17 | empty |
| 5 | 65 | 0.33 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5R2S1
- Elsewhere: UniProt B5R2S1 · AlphaFold DB B5R2S1
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