Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase F (B7MVW5)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7MVW5
- Type
- protein
- Length
- 479 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa5c421143c0C3c8674B862e86A6772B81f7Aef95
- Molecule
- Ribosomal RNA small subunit methyltransferase F
- UniProt
- B7MVW5
- Pockets
- 8 · best druggability 0.54
Structure
1 distinct chain · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase F | protein | 479 | 33% helix, 25% strand | B7MVW5 |
Pockets
8 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 269 | 0.54 | 0.76 | 37 | empty |
| 2 | 162 | 0.47 | 0.77 | 27 | empty |
| 3 | 54 | 0.43 | 0.83 | 18 | empty |
| 4 | 112 | 0.38 | 0.75 | 20 | empty |
| 5 | 59 | 0.36 | 0.78 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7MVW5
- Elsewhere: UniProt B7MVW5 · AlphaFold DB B7MVW5
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