Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase E (Q9ZKD2)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9ZKD2
- Type
- protein
- Length
- 226 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- Ribosomal RNA small subunit methyltransferase E
- UniProt
- Q9ZKD2
- Pockets
- 2 · best druggability 0.65
Structure
1 distinct chain · 29% helix, 29% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase E | protein | 226 | 29% helix, 29% strand | Q9ZKD2 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 103 | 0.65 | 0.89 | 22 | empty |
| 2 | 79 | 0.34 | 0.75 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9ZKD2
- Elsewhere: UniProt Q9ZKD2 · AlphaFold DB Q9ZKD2
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