Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase B (Q88B41)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q88B41
- Type
- protein
- Length
- 448 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x167C74E26f98Af17d629E9e0a9455d97c33EA927
- Molecule
- Ribosomal RNA small subunit methyltransferase B
- UniProt
- Q88B41
- Pockets
- 2 · best druggability 0.70
Structure
1 distinct chain · 49% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase B | protein | 448 | 49% helix, 14% strand | Q88B41 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 862 | 0.70 | 0.75 | 69 | empty |
| 2 | 104 | 0.56 | 0.84 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q88B41
- Elsewhere: UniProt Q88B41 · AlphaFold DB Q88B41
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.