Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase B (Q9CKP7)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9CKP7
- Type
- protein
- Length
- 446 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- Ribosomal RNA small subunit methyltransferase B
- UniProt
- Q9CKP7
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 50% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase B | protein | 446 | 50% helix, 14% strand | Q9CKP7 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1072 | 0.72 | 0.75 | 70 | empty |
| 2 | 71 | 0.33 | 0.75 | 15 | empty |
| 3 | 57 | 0.27 | 0.73 | 13 | empty |
| 4 | 56 | 0.26 | 0.73 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9CKP7
- Elsewhere: UniProt Q9CKP7 · AlphaFold DB Q9CKP7
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