Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (Q5LQN0)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5LQN0
- Type
- protein
- Length
- 279 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd0F50FFcB725A32341066a3d047628d87754e5f8
- Molecule
- Ribosomal RNA small subunit methyltransferase a
- UniProt
- Q5LQN0
- Pockets
- 3 · best druggability 0.70
Structure
1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase a | protein | 279 | 40% helix, 19% strand | Q5LQN0 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 131 | 0.70 | 0.91 | 33 | empty |
| 2 | 93 | 0.41 | 0.77 | 18 | empty |
| 3 | 59 | 0.31 | 0.75 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5LQN0
- Elsewhere: UniProt Q5LQN0 · AlphaFold DB Q5LQN0
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