Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (B7JWJ7)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7JWJ7
- Type
- protein
- Length
- 272 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x02341c70C616cfDFAF546e41Ec04921b9fEa2575
- Molecule
- Ribosomal RNA small subunit methyltransferase a
- UniProt
- B7JWJ7
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 42% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase a | protein | 272 | 42% helix, 19% strand | B7JWJ7 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 154 | 0.74 | 0.92 | 35 | empty |
| 2 | 105 | 0.40 | 0.76 | 19 | empty |
| 3 | 75 | 0.38 | 0.78 | 14 | empty |
| 4 | 71 | 0.35 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7JWJ7
- Elsewhere: UniProt B7JWJ7 · AlphaFold DB B7JWJ7
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