Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (C1D9C2)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C1D9C2
- Type
- protein
- Length
- 262 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9c9dcf6836cd7fFd66Fb8f047B683745f57039e3
- Molecule
- Ribosomal RNA small subunit methyltransferase a
- UniProt
- C1D9C2
- Pockets
- 2 · best druggability 0.73
Structure
1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase a | protein | 262 | 41% helix, 19% strand | C1D9C2 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 165 | 0.73 | 0.91 | 35 | empty |
| 2 | 57 | 0.32 | 0.76 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C1D9C2
- Elsewhere: UniProt C1D9C2 · AlphaFold DB C1D9C2
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