Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (Q4JU23)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q4JU23
- Type
- protein
- Length
- 316 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x91cB1A9982C8247E3BC25D698cCCD89D78d736B6
- Molecule
- Ribosomal RNA small subunit methyltransferase a
- UniProt
- Q4JU23
- Pockets
- 4 · best druggability 0.72
Structure
1 distinct chain · 41% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase a | protein | 316 | 41% helix, 16% strand | Q4JU23 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 143 | 0.72 | 0.91 | 33 | empty |
| 2 | 172 | 0.51 | 0.78 | 22 | empty |
| 3 | 77 | 0.43 | 0.81 | 19 | empty |
| 4 | 65 | 0.32 | 0.75 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4JU23
- Elsewhere: UniProt Q4JU23 · AlphaFold DB Q4JU23
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