Research workbench
AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit methyltransferase a (Q3J2B9)
Analyse AlphaFold monomer V2.0 prediction for ribosomal RNA small subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q3J2B9
- Type
- protein
- Length
- 278 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa468e9aC7533c96f63F5B3a2d6A012D6915744dF
- Molecule
- Ribosomal RNA small subunit methyltransferase a
- UniProt
- Q3J2B9
- Pockets
- 3 · best druggability 0.69
Structure
1 distinct chain · 40% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal RNA small subunit methyltransferase a | protein | 278 | 40% helix, 18% strand | Q3J2B9 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 146 | 0.69 | 0.89 | 32 | empty |
| 2 | 75 | 0.41 | 0.79 | 17 | empty |
| 3 | 59 | 0.33 | 0.76 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q3J2B9
- Elsewhere: UniProt Q3J2B9 · AlphaFold DB Q3J2B9
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