Research workbench
AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase rsga (P52640)
Analyse AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P52640
- Type
- protein
- Length
- 369 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x661f92Fc5950020C7aB410B5F5b9a3f429F49Ae5
- Molecule
- Small ribosomal subunit biogenesis GTPase rsga
- UniProt
- P52640
- Pockets
- 5 · best druggability 0.60
Structure
1 distinct chain · 30% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small ribosomal subunit biogenesis GTPase rsga | protein | 369 | 30% helix, 21% strand | P52640 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 382 | 0.60 | 0.76 | 44 | empty |
| 2 | 174 | 0.53 | 0.79 | 27 | empty |
| 3 | 94 | 0.38 | 0.76 | 13 | empty |
| 4 | 85 | 0.32 | 0.74 | 18 | empty |
| 5 | 54 | 0.26 | 0.72 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P52640
- Elsewhere: UniProt P52640 · AlphaFold DB P52640
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