Research workbench
AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase rsga (Q6D036)
Analyse AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6D036
- Type
- protein
- Length
- 349 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xcC0F357d3A40260d7607Ff6ffD66bd82a06E96Fa
- Molecule
- Small ribosomal subunit biogenesis GTPase rsga
- UniProt
- Q6D036
- Pockets
- 5 · best druggability 0.59
Structure
1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small ribosomal subunit biogenesis GTPase rsga | protein | 349 | 34% helix, 25% strand | Q6D036 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 213 | 0.59 | 0.81 | 40 | empty |
| 2 | 128 | 0.42 | 0.75 | 19 | empty |
| 3 | 104 | 0.34 | 0.73 | 19 | empty |
| 4 | 56 | 0.32 | 0.76 | 16 | empty |
| 5 | 75 | 0.31 | 0.73 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6D036
- Elsewhere: UniProt Q6D036 · AlphaFold DB Q6D036
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