Research workbench
AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase rsga (Q0VMD9)
Analyse AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0VMD9
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8F9c7747101075C570E34CAd4Ed2A4C01e9b2C28
- Molecule
- Small ribosomal subunit biogenesis GTPase rsga
- UniProt
- Q0VMD9
- Pockets
- 6 · best druggability 0.62
Structure
1 distinct chain · 35% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small ribosomal subunit biogenesis GTPase rsga | protein | 352 | 35% helix, 21% strand | Q0VMD9 |
Pockets
6 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 375 | 0.62 | 0.77 | 36 | empty |
| 2 | 98 | 0.44 | 0.78 | 14 | empty |
| 3 | 87 | 0.42 | 0.79 | 17 | empty |
| 4 | 123 | 0.40 | 0.75 | 19 | empty |
| 5 | 126 | 0.39 | 0.74 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0VMD9
- Elsewhere: UniProt Q0VMD9 · AlphaFold DB Q0VMD9
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