Research workbench
AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase rsga 1 (Q87L00)
Analyse AlphaFold monomer V2.0 prediction for small ribosomal subunit biogenesis GTPase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q87L00
- Type
- protein
- Length
- 354 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xFe308e213eB9385b3306741098D0628AB843a2D5
- Molecule
- Small ribosomal subunit biogenesis GTPase rsga 1
- UniProt
- Q87L00
- Pockets
- 6 · best druggability 0.49
Structure
1 distinct chain · 37% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Small ribosomal subunit biogenesis GTPase rsga 1 | protein | 354 | 37% helix, 25% strand | Q87L00 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 193 | 0.49 | 0.76 | 26 | empty |
| 2 | 111 | 0.42 | 0.77 | 17 | empty |
| 3 | 93 | 0.39 | 0.76 | 19 | empty |
| 4 | 94 | 0.36 | 0.74 | 20 | empty |
| 5 | 73 | 0.34 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q87L00
- Elsewhere: UniProt Q87L00 · AlphaFold DB Q87L00
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