Research workbench
AlphaFold monomer V2.0 prediction for lysine-specific demethylase RSBN1L (Q6PCB5)
Analyse AlphaFold monomer V2.0 prediction for lysine-specific demethylase RSBN1L… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6PCB5
- Type
- protein
- Length
- 846 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2C522BD0223BAA5B014C12f6B6578EeeF8dF17e3
- Molecule
- Lysine-specific demethylase RSBN1L
- UniProt
- Q6PCB5
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 14% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine-specific demethylase RSBN1L | protein | 846 | 14% helix, 12% strand | Q6PCB5 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 677 | 0.78 | 0.83 | 77 | empty |
| 2 | 141 | 0.54 | 0.82 | 23 | empty |
| 3 | 100 | 0.47 | 0.80 | 17 | empty |
| 4 | 52 | 0.38 | 0.81 | 13 | empty |
| 5 | 50 | 0.31 | 0.77 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6PCB5
- Elsewhere: UniProt Q6PCB5 · AlphaFold DB Q6PCB5
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