Research workbench
AlphaFold monomer V2.0 prediction for lysine-specific demethylase 9 (Q80T69)
Analyse AlphaFold monomer V2.0 prediction for lysine-specific demethylase 9 (Q80T69) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q80T69
- Type
- protein
- Length
- 795 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Lysine-specific demethylase 9
- UniProt
- Q80T69
- Pockets
- 5 · best druggability 0.62
Structure
1 distinct chain · 13% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine-specific demethylase 9 | protein | 795 | 13% helix, 13% strand | Q80T69 |
Pockets
5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 402 | 0.62 | 0.77 | 45 | empty |
| 2 | 282 | 0.61 | 0.79 | 36 | empty |
| 3 | 89 | 0.55 | 0.85 | 21 | empty |
| 4 | 139 | 0.53 | 0.81 | 26 | empty |
| 5 | 58 | 0.31 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q80T69
- Elsewhere: UniProt Q80T69 · AlphaFold DB Q80T69
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