Research workbench
AlphaFold monomer V2.0 prediction for lysine-specific demethylase 9 (Q5VWQ0)
Analyse AlphaFold monomer V2.0 prediction for lysine-specific demethylase 9 (Q5VWQ0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5VWQ0
- Type
- protein
- Length
- 802 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x738c1929c69B751bD0Be0B962D9bac20B631aAc6
- Molecule
- Lysine-specific demethylase 9
- UniProt
- Q5VWQ0
- Pockets
- 8 · best druggability 0.70
Structure
1 distinct chain · 13% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysine-specific demethylase 9 | protein | 802 | 13% helix, 13% strand | Q5VWQ0 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 116 | 0.70 | 0.92 | 32 | empty |
| 2 | 265 | 0.64 | 0.81 | 36 | empty |
| 3 | 329 | 0.60 | 0.78 | 46 | empty |
| 4 | 157 | 0.52 | 0.79 | 25 | empty |
| 5 | 76 | 0.42 | 0.80 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5VWQ0
- Elsewhere: UniProt Q5VWQ0 · AlphaFold DB Q5VWQ0
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