Research workbench

AlphaFold monomer V2.0 prediction for 40S ribosomal protein S9 (Q6ZWN5)

Analyse AlphaFold monomer V2.0 prediction for 40S ribosomal protein S9 (Q6ZWN5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q6ZWN5
Type: protein
Length: 194 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x4Ea5fCC25611AAa9B10a72a49dC4816Fe9839C7f
Molecule: 40S ribosomal protein S9
UniProt: Q6ZWN5
Pockets: 1 · best druggability 0.40

Structure

1 distinct chain · 52% helix, 5% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	40S ribosomal protein S9	protein	194	52% helix, 5% strand	Q6ZWN5

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	110	0.40	0.76	18	empty

Compared structures

7LS2 · 80S ribosome from mouse bound to eEF2 (Class I) · an experimental structure of the same protein · chain A against L3, TM-score 0.92
7LS1 · 80S ribosome from mouse bound to eEF2 (Class II) · an experimental structure of the same protein · chain A against L3, TM-score 0.92
7CPV · Cryo-EM structure of 80S ribosome from mouse testis · an experimental structure of the same protein · chain A against SJ, TM-score 0.66
7CPU · Cryo-EM structure of 80S ribosome from mouse kidney · an experimental structure of the same protein · chain A against SJ, TM-score 0.66

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q6ZWN5
Elsewhere: UniProt Q6ZWN5 · AlphaFold DB Q6ZWN5

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