Research workbench
AlphaFold monomer V2.0 prediction for 30S ribosomal protein S7 (Q5JE04)
Analyse AlphaFold monomer V2.0 prediction for 30S ribosomal protein S7 (Q5JE04) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5JE04
- Type
- protein
- Length
- 215 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEFAD4000e8E7465Fb4Fef4E07461d1cb5cdD8b3C
- Molecule
- 30S ribosomal protein S7
- UniProt
- Q5JE04
- Pockets
- 2 · best druggability 0.55
Structure
1 distinct chain · 46% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 30S ribosomal protein S7 | protein | 215 | 46% helix, 10% strand | Q5JE04 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 216 | 0.55 | 0.78 | 37 | empty |
| 2 | 75 | 0.38 | 0.78 | 16 | empty |
Compared structures
- 6SKG · Cryo-EM Structure of T. kodakarensis 70S ribosome in TkNat10 deleted strain · an experimental structure of the same protein · chain A against Ai, TM-score 0.89
- 6SKF · Cryo-EM Structure of T. kodakarensis 70S ribosome · an experimental structure of the same protein · chain A against Ai, TM-score 0.89
- 6TH6 · Cryo-EM Structure of T. kodakarensis 70S ribosome · an experimental structure of the same protein · chain A against Ai, TM-score 0.88
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5JE04
- Elsewhere: UniProt Q5JE04 · AlphaFold DB Q5JE04
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