Research workbench
AlphaFold monomer V2.0 prediction for 40S ribosomal protein S4 (Q8SRB9)
Analyse AlphaFold monomer V2.0 prediction for 40S ribosomal protein S4 (Q8SRB9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8SRB9
- Type
- protein
- Length
- 268 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xaa53776A41fB2e67da75A96E8a53746b6874aAB4
- Molecule
- 40S ribosomal protein S4
- UniProt
- Q8SRB9
- Pockets
- 3 · best druggability 0.51
Structure
1 distinct chain · 16% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 40S ribosomal protein S4 | protein | 268 | 16% helix, 36% strand | Q8SRB9 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 113 | 0.51 | 0.81 | 24 | empty |
| 2 | 57 | 0.38 | 0.80 | 14 | empty |
| 3 | 54 | 0.31 | 0.76 | 15 | empty |
Compared structures
- 7QEP · Cryo-EM structure of the ribosome from Encephalitozoon cuniculi · an experimental structure of the same protein · chain A against S4, TM-score 0.94
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8SRB9
- Elsewhere: UniProt Q8SRB9 · AlphaFold DB Q8SRB9
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