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AlphaFold monomer V2.0 prediction for 40S ribosomal protein S4, Y isoform 1 (P22090)

Analyse AlphaFold monomer V2.0 prediction for 40S ribosomal protein S4, Y isoform 1… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
P22090
Type
protein
Length
263 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0x0EA189b2343A464f560b44103f6A3396Da1dA8a9
Molecule
40S ribosomal protein S4, Y isoform 1
UniProt
P22090
Pockets
2 · best druggability 0.44

Structure

1 distinct chain · 19% helix, 35% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A40S ribosomal protein S4, Y isoform 1protein26319% helix, 35% strandP22090

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1660.440.8216empty
2890.330.7319empty

Compared structures

  • 6OLG · Human ribosome nascent chain complex stalled by a drug-like small molecule (CDH1_RNC with… · an experimental structure of the same protein · chain A against BE, TM-score 0.96
  • 5FLX · Mammalian 40S HCV-ires complex · an experimental structure of the same protein · chain A against E, TM-score 0.96
  • 5FLX · Mammalian 40S HCV-IRES complex · an experimental structure of the same protein · chain A against E, TM-score 0.96
  • 6OLZ · Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like molecule with PP… · an experimental structure of the same protein · chain A against BE, TM-score 0.95

Analyse

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