Research workbench
AlphaFold monomer V2.0 prediction for 30S ribosomal protein S4E (Q8U011)
Analyse AlphaFold monomer V2.0 prediction for 30S ribosomal protein S4E (Q8U011) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8U011
- Type
- protein
- Length
- 243 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x32d275c57E5de15892DA4bB94f0896D6e9c91d02
- Molecule
- 30S ribosomal protein S4E
- UniProt
- Q8U011
- Pockets
- 4 · best druggability 0.52
Structure
1 distinct chain · 12% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 30S ribosomal protein S4E | protein | 243 | 12% helix, 38% strand | Q8U011 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 101 | 0.52 | 0.83 | 14 | empty |
| 2 | 63 | 0.47 | 0.84 | 17 | empty |
| 3 | 51 | 0.31 | 0.77 | 13 | empty |
| 4 | 50 | 0.24 | 0.72 | 16 | empty |
Compared structures
- 4V6U · Promiscuous behavior of proteins in archaeal ribosomes revealed by cryo-EM: implications… · an experimental structure of the same protein · chain A against AE, TM-score 0.92
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8U011
- Elsewhere: UniProt Q8U011 · AlphaFold DB Q8U011
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