Research workbench
AlphaFold monomer V2.0 prediction for 30S ribosomal protein S1 (P0AG69)
Analyse AlphaFold monomer V2.0 prediction for 30S ribosomal protein S1 (P0AG69) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0AG69
- Type
- protein
- Length
- 557 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9a3d3E3c804559Ff57D6bdF22acA278B4f92e6F7
- Molecule
- 30S ribosomal protein S1
- UniProt
- P0AG69
- Pockets
- 3 · best druggability 0.36
Structure
1 distinct chain · 26% helix, 38% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 30S ribosomal protein S1 | protein | 557 | 26% helix, 38% strand | P0AG69 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 105 | 0.36 | 0.74 | 19 | empty |
| 2 | 100 | 0.33 | 0.73 | 16 | empty |
| 3 | 68 | 0.31 | 0.75 | 16 | empty |
Compared structures
- 8URY · Escherichia coli transcription-translation coupled complex class B (TTC-B) containing… · an experimental structure of the same protein · chain A against H, TM-score 0.26
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0AG69
- Elsewhere: UniProt P0AG69 · AlphaFold DB P0AG69
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