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AlphaFold monomer V2.0 prediction for 30S ribosomal protein S13 (P0A7T1)

Analyse AlphaFold monomer V2.0 prediction for 30S ribosomal protein S13 (P0A7T1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession
P0A7T1
Type
protein
Length
118 residues
Chains
1
Collection
MolNFT v1 / AlphaFold
Contract
0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner
0xd591AB2c86adCdf200aB28b9BEb496Cf7DFb1867
Molecule
30S ribosomal protein S13
UniProt
P0A7T1

Structure

1 distinct chain · 50% helix, 5% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A30S ribosomal protein S13protein11850% helix, 5% strandP0A7T1

Compared structures

  • 5WFS · 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4) · an experimental structure of the same protein · chain A against m, TM-score 0.93
  • 5WF0 · 70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C2) · an experimental structure of the same protein · chain A against m, TM-score 0.93
  • 6AWB · Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state · an experimental structure of the same protein · chain A against P, TM-score 0.87
  • 6AWC · Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state · an experimental structure of the same protein · chain A against P, TM-score 0.86
  • 4V5B · Structure of PDF binding helix in complex with the ribosome. · an experimental structure of the same protein · chain A against BM, TM-score 0.85
  • 6AWD · Structure of 30S (S1 depleted) ribosomal subunit and RNA polymerase complex · an experimental structure of the same protein · chain A against P, TM-score 0.85
  • 5UZ4 · The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint… · an experimental structure of the same protein · chain A against M, TM-score 0.82
  • 5UZ4 · The cryo-EM structure of yjeq bound to the 30S subunit suggests a fidelity checkpoint… · an experimental structure of the same protein · chain A against M, TM-score 0.82

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