Research workbench
AlphaFold monomer V2.0 prediction for rRNA biogenesis protein RRP36 (C5JYW1)
Analyse AlphaFold monomer V2.0 prediction for rRNA biogenesis protein RRP36 (C5JYW1) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C5JYW1
- Type
- protein
- Length
- 356 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x16C867aF28165664B3FC5A5E54F51be204a1Beb5
- Molecule
- RRNA biogenesis protein RRP36
- UniProt
- C5JYW1
- Pockets
- 4 · best druggability 0.55
Structure
1 distinct chain · 45% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RRNA biogenesis protein RRP36 | protein | 356 | 45% helix, 0% strand | C5JYW1 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 335 | 0.55 | 0.75 | 26 | empty |
| 2 | 336 | 0.53 | 0.74 | 43 | empty |
| 3 | 116 | 0.47 | 0.79 | 18 | empty |
| 4 | 50 | 0.24 | 0.73 | 12 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C5JYW1
- Elsewhere: UniProt C5JYW1 · AlphaFold DB C5JYW1
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