Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase 2, CHLOROPLASTIC/MITOCHONDRIAL (Q8VWF8)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8VWF8
- Type
- protein
- Length
- 1,020 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8DD273cF423965BB2D13d0c9e489307D68b23f90
- Molecule
- DNA-directed RNA polymerase 2, CHLOROPLASTIC/MITOCHONDRIAL
- UniProt
- Q8VWF8
- Pockets
- 12 · best druggability 0.85
Structure
1 distinct chain · 52% helix, 9% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase 2, CHLOROPLASTIC/MITOCHONDRIAL | protein | 1020 | 52% helix, 9% strand | Q8VWF8 |
Pockets
12 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 849 | 0.85 | 0.87 | 82 | empty |
| 2 | 955 | 0.82 | 0.83 | 68 | empty |
| 3 | 357 | 0.69 | 0.82 | 37 | empty |
| 4 | 341 | 0.54 | 0.74 | 35 | empty |
| 5 | 115 | 0.52 | 0.81 | 22 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8VWF8
- Elsewhere: UniProt Q8VWF8 · AlphaFold DB Q8VWF8
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