Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (B1JJK0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1JJK0
- Type
- protein
- Length
- 1,406 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x084e134B9Fbe5614bf2e5C5cFF468Cf085946847
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- B1JJK0
- Pockets
- 17 · best druggability 0.80
Structure
1 distinct chain · 39% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1406 | 39% helix, 20% strand | B1JJK0 |
Pockets
17 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1015 | 0.80 | 0.82 | 81 | empty |
| 2 | 680 | 0.74 | 0.80 | 53 | empty |
| 3 | 895 | 0.71 | 0.75 | 53 | empty |
| 4 | 617 | 0.70 | 0.77 | 38 | empty |
| 5 | 561 | 0.66 | 0.77 | 48 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1JJK0
- Elsewhere: UniProt B1JJK0 · AlphaFold DB B1JJK0
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