Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (P0C0D9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0C0D9
- Type
- protein
- Length
- 989 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA98E98d7D7aC99F2d3D548BF567847cac90aca12
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- P0C0D9
- Pockets
- 11 · best druggability 0.77
Structure
1 distinct chain · 45% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 989 | 45% helix, 15% strand | P0C0D9 |
Pockets
11 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 974 | 0.77 | 0.79 | 76 | empty |
| 2 | 114 | 0.57 | 0.85 | 19 | empty |
| 3 | 319 | 0.54 | 0.74 | 33 | empty |
| 4 | 179 | 0.48 | 0.77 | 31 | empty |
| 5 | 127 | 0.43 | 0.76 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C0D9
- Elsewhere: UniProt P0C0D9 · AlphaFold DB P0C0D9
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