Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (P0DF33)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DF33
- Type
- protein
- Length
- 1,207 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xEA1943439CF47B2a5abd208BB4aE6c8D9a47Fac9
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- P0DF33
- Pockets
- 15 · best druggability 0.73
Structure
1 distinct chain · 44% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1207 | 44% helix, 15% strand | P0DF33 |
Pockets
15 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 759 | 0.73 | 0.78 | 70 | empty |
| 2 | 759 | 0.73 | 0.78 | 61 | empty |
| 3 | 618 | 0.71 | 0.78 | 42 | empty |
| 4 | 895 | 0.69 | 0.75 | 64 | empty |
| 5 | 475 | 0.62 | 0.76 | 41 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DF33
- Elsewhere: UniProt P0DF33 · AlphaFold DB P0DF33
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