Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A4YBY9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4YBY9
- Type
- protein
- Length
- 1,405 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBeB220F0B5b0C48F46B5DDd3E3b071BC0827f8D6
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A4YBY9
- Pockets
- 17 · best druggability 0.80
Structure
1 distinct chain · 40% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1405 | 40% helix, 20% strand | A4YBY9 |
Pockets
17 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1029 | 0.80 | 0.81 | 83 | empty |
| 2 | 919 | 0.74 | 0.77 | 55 | empty |
| 3 | 810 | 0.73 | 0.78 | 74 | empty |
| 4 | 883 | 0.70 | 0.75 | 53 | empty |
| 5 | 608 | 0.69 | 0.77 | 39 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4YBY9
- Elsewhere: UniProt A4YBY9 · AlphaFold DB A4YBY9
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