Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A9MHE9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9MHE9
- Type
- protein
- Length
- 1,407 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x2CfD32b173ecf9861B5DB5dFF2452f89E7bCADff
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A9MHE9
- Pockets
- 16 · best druggability 0.78
Structure
1 distinct chain · 39% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1407 | 39% helix, 19% strand | A9MHE9 |
Pockets
16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1143 | 0.78 | 0.80 | 86 | empty |
| 2 | 1030 | 0.74 | 0.77 | 80 | empty |
| 3 | 935 | 0.70 | 0.75 | 54 | empty |
| 4 | 623 | 0.70 | 0.77 | 40 | empty |
| 5 | 514 | 0.66 | 0.77 | 41 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9MHE9
- Elsewhere: UniProt A9MHE9 · AlphaFold DB A9MHE9
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