Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A1R8V3)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A1R8V3
- Type
- protein
- Length
- 1,299 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A1R8V3
- Pockets
- 20 · best druggability 0.72
Structure
1 distinct chain · 46% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1299 | 46% helix, 14% strand | A1R8V3 |
Pockets
20 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 410 | 0.72 | 0.83 | 49 | empty |
| 2 | 951 | 0.71 | 0.75 | 52 | empty |
| 3 | 532 | 0.70 | 0.78 | 33 | empty |
| 4 | 544 | 0.66 | 0.77 | 41 | empty |
| 5 | 448 | 0.62 | 0.76 | 60 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A1R8V3
- Elsewhere: UniProt A1R8V3 · AlphaFold DB A1R8V3
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