Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q04E86)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q04E86
- Type
- protein
- Length
- 1,233 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x66cc7a0eB7D43468C5dDa46c4E407dc0C1A1C67C
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q04E86
- Pockets
- 17 · best druggability 0.72
Structure
1 distinct chain · 45% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1233 | 45% helix, 15% strand | Q04E86 |
Pockets
17 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 625 | 0.72 | 0.78 | 38 | empty |
| 2 | 863 | 0.68 | 0.74 | 62 | empty |
| 3 | 276 | 0.68 | 0.83 | 42 | empty |
| 4 | 565 | 0.65 | 0.76 | 41 | empty |
| 5 | 314 | 0.61 | 0.79 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q04E86
- Elsewhere: UniProt Q04E86 · AlphaFold DB Q04E86
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