Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q5ZYP9)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5ZYP9
- Type
- protein
- Length
- 1,401 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q5ZYP9
- Pockets
- 16 · best druggability 0.79
Structure
1 distinct chain · 40% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1401 | 40% helix, 19% strand | Q5ZYP9 |
Pockets
16 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1147 | 0.79 | 0.80 | 84 | empty |
| 2 | 818 | 0.75 | 0.79 | 57 | empty |
| 3 | 648 | 0.70 | 0.77 | 47 | empty |
| 4 | 839 | 0.69 | 0.75 | 50 | empty |
| 5 | 574 | 0.67 | 0.77 | 48 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZYP9
- Elsewhere: UniProt Q5ZYP9 · AlphaFold DB Q5ZYP9
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