Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (B9M6V1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B9M6V1
- Type
- protein
- Length
- 1,377 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x36396A7ff03852f3Da88FCa9E3F53DE29515B22F
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- B9M6V1
- Pockets
- 16 · best druggability 0.77
Structure
1 distinct chain · 39% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1377 | 39% helix, 19% strand | B9M6V1 |
Pockets
16 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 940 | 0.77 | 0.80 | 75 | empty |
| 2 | 1181 | 0.77 | 0.79 | 91 | empty |
| 3 | 1103 | 0.73 | 0.76 | 96 | empty |
| 4 | 924 | 0.72 | 0.76 | 59 | empty |
| 5 | 662 | 0.70 | 0.77 | 40 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B9M6V1
- Elsewhere: UniProt B9M6V1 · AlphaFold DB B9M6V1
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