Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (Q5NID1)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5NID1
- Type
- protein
- Length
- 1,417 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd1A2963012bEcbC7A8f505464439Ab678C48936f
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- Q5NID1
- Pockets
- 16 · best druggability 0.76
Structure
1 distinct chain · 39% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1417 | 39% helix, 20% strand | Q5NID1 |
Pockets
16 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1153 | 0.76 | 0.78 | 85 | empty |
| 2 | 571 | 0.70 | 0.78 | 38 | empty |
| 3 | 499 | 0.68 | 0.79 | 41 | empty |
| 4 | 848 | 0.68 | 0.75 | 47 | empty |
| 5 | 468 | 0.64 | 0.77 | 44 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5NID1
- Elsewhere: UniProt Q5NID1 · AlphaFold DB Q5NID1
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