Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A4J104)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4J104
- Type
- protein
- Length
- 1,185 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD19Af9471eB6CA1bcfd4838F07B82c3d9E99d50A
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A4J104
- Pockets
- 15 · best druggability 0.74
Structure
1 distinct chain · 45% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1185 | 45% helix, 15% strand | A4J104 |
Pockets
15 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 938 | 0.74 | 0.77 | 72 | empty |
| 2 | 699 | 0.72 | 0.78 | 47 | empty |
| 3 | 672 | 0.69 | 0.77 | 72 | empty |
| 4 | 828 | 0.67 | 0.74 | 62 | empty |
| 5 | 451 | 0.58 | 0.74 | 36 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4J104
- Elsewhere: UniProt A4J104 · AlphaFold DB A4J104
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