Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A5FRK6)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5FRK6
- Type
- protein
- Length
- 1,295 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x09A220F6F8d21eC971995097898C2656fed98964
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A5FRK6
- Pockets
- 15 · best druggability 0.77
Structure
1 distinct chain · 46% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1295 | 46% helix, 17% strand | A5FRK6 |
Pockets
15 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 840 | 0.77 | 0.81 | 77 | empty |
| 2 | 1010 | 0.73 | 0.76 | 65 | empty |
| 3 | 647 | 0.71 | 0.78 | 43 | empty |
| 4 | 462 | 0.62 | 0.76 | 42 | empty |
| 5 | 320 | 0.62 | 0.79 | 32 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5FRK6
- Elsewhere: UniProt A5FRK6 · AlphaFold DB A5FRK6
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