Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A3PGJ0)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3PGJ0
- Type
- protein
- Length
- 1,415 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x999baaE1ba9F2509deDB879851F6Fc2FB0a1B63a
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A3PGJ0
- Pockets
- 18 · best druggability 0.75
Structure
1 distinct chain · 39% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1415 | 39% helix, 19% strand | A3PGJ0 |
Pockets
18 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1025 | 0.75 | 0.78 | 79 | empty |
| 2 | 676 | 0.73 | 0.80 | 59 | empty |
| 3 | 454 | 0.73 | 0.83 | 49 | empty |
| 4 | 721 | 0.71 | 0.78 | 73 | empty |
| 5 | 856 | 0.70 | 0.75 | 45 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3PGJ0
- Elsewhere: UniProt A3PGJ0 · AlphaFold DB A3PGJ0
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