Research workbench
AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta' (A9M5Q8)
Analyse AlphaFold monomer V2.0 prediction for DNA-directed RNA polymerase subunit beta'… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A9M5Q8
- Type
- protein
- Length
- 1,400 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7782F4817b37743d738e9aF842bf74bd50f2015E
- Molecule
- DNA-directed RNA polymerase subunit beta'
- UniProt
- A9M5Q8
- Pockets
- 18 · best druggability 0.78
Structure
1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-directed RNA polymerase subunit beta' | protein | 1400 | 41% helix, 19% strand | A9M5Q8 |
Pockets
18 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 992 | 0.78 | 0.80 | 99 | empty |
| 2 | 749 | 0.77 | 0.82 | 93 | empty |
| 3 | 346 | 0.72 | 0.84 | 44 | empty |
| 4 | 873 | 0.71 | 0.76 | 51 | empty |
| 5 | 577 | 0.69 | 0.79 | 73 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A9M5Q8
- Elsewhere: UniProt A9M5Q8 · AlphaFold DB A9M5Q8
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